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Scooped by Dr. Stefan Gruenwald
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NIH: Over 1,000 genome and human genetics videos released

NIH: Over 1,000 genome and human genetics videos released | Amazing Science | Scoop.it

A full listing of videos featuring the science, research, programs and staff of the National Human Genome Research Institute, as well as researchers and scientists from around the world.

Many of these videos were created and produced by Genome Productions, a part of the Communications and Public Liaison Branch of the National Human Genome Research Institute. All government-produced video and audio clips are in the public domain and may be freely distributed and copied, but, as a courtesy, it is requested that the National Human Genome Research Institute be given an appropriate acknowledgement: Courtesy: National Human Genome Research Institute.

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Rescooped by Dr. Stefan Gruenwald from Tracking the Future
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Machine Learning and Big Data Are Changing the Face of Biological Sciences

Until recently, the wet lab has been a crucial component of every biologist. Today's advances in the production of massive amounts of data and the creation of machine-learning algorithms for processing that data are changing the face of biological science—making it possible to do real science without a wet lab. David Heckerman shares several examples of how this transformation in the area of genomics is changing the pace of scientific breakthroughs.


Via Szabolcs Kósa
davidgibson's curator insight, May 28, 2013 11:05 PM

This 36 min video is well worth the time spent - to get an idea (hopefully a transferrable one) about Big Data and the frontiers of science. In this case both "wet lab" (test tubes microscopes) and "dry lab" (computer modeling with machine learning) and needed and so is content as well as computational literacy.

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Cracking Your Genetic Code - PBS

Using genetic information to diagnose and cure disease ''Know thyself.'' / ''The burden of knowing.'' March 2012 Written, produced and directed by Sarah Holt, PBS Nova, WGBH Educational Foundation.

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EMBO 2012 - International workshop on Evolution in the Time of Genomics

Molecular evolution was born fifty years before the planned Conference, with a seminal paper by Zuckerkandl and Pauling (1962) which demonstrated that aminoacid changes in the globins followed a molecular clock and could provide information on the phylogeny of vertebrates and on the timing of their appearance on earth.

Principal themes and objectives of the event From changes in aminoacids to changes in nucleotides, the molecular level has provided an essential input into evolutionary investigations for the past decades. More recently, the molecular level has moved from the genes to the genome, so far mainly in the case of vertebrates (in which the coding sequences only represent about 2% of the total). The availability of full genome sequences has provided new possibilities for investigators in the field and major problems can now be tackled in a very precise way using bioinformatic tools. Indeed, an example of this approach has been the recent solution (Bernardi, 2007)of a twenty-year-old debate, that between neutralists and selectionists.


One of the major current debates concerns adaptive vs. non-adaptive evolution. Random events in evolution were originally raised as a fundamental problem by Jacques Monod in his famous book "Chance and necessity". The problem has now been shifted to the genome level. A preliminary discussion took place in October 2010 in a Meeting "Chance and Necessity in Evolution" (Ravello, Italy; papers are in press in a special issue of Genome Biology and Evolution). The proposed meeting should go deeper into such a basic issue. While this will be one of the main subject of the meeting in which different views will confront each other (with Bernardi, Jarosz, Koonin, Ohta, Ptashne), other basic topics in Genome Evolution will be addressed. Werner Arber, Hamilton Smith (two Nobel Laureates) and George Church will discuss in depth the results obtained so far "directing" evolution in microbial systems, their interpretation and even the ethical issues raised. Davidson, Gehring and Gojobori will deal with the evolution of developmental processes; Martin, Saccone and Wallace with the evolution of mitochondrial genomes; Okada and Shapiro with the impact of mobile elements on genome evolution; Jeffreys and Saitou with recombination and biased gene conversion; Bustamante, Felsenfeld, Hartl and Haussler with regulation of gene expression and copy number variation in the human genome. Last but not least, Emile Zuckerkandl will recollect the beginning of Molecular Evolution.

 

http://events.embo.org/12-evolution/

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Rescooped by Dr. Stefan Gruenwald from Personal Genomics
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Early Reports From the ‘Dark Matter’ of the Genome

Early Reports From the ‘Dark Matter’ of the Genome | Amazing Science | Scoop.it

A collection of new studies on the genomes of two model organisms has moved the frontiers of biology forward, and hints at methods that may someday make (RT @ScienceChannel: Early reports from the dark matter of the genome: http://ow.ly/3uNoP)


Via Portable Genomics
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Small handheld device tracks disease mutations within minutes

QuantuMDx Group is one of the most exciting biotechs to emerge from the UK and is developing a low cost, simple-to-use, handheld laboratory for 15-minute diagnosis of disease at the patient's side, for commercialisation in 2015. The robust device, which reads and sequences DNA and converts it into binary code using a tiny computer chip, is ideally suited to help address the humanitarian health burden by offering molecular diagnostics at a fraction of the price of traditional testing.

 

Rapidly & accurately detecting and monitoring emerging drug resistance of infectious diseases such as malaria, TB and HIV will enable health professionals to immediately prescribe the most effective drug against that disease. Once the device has passed regulatory approval, it will be available in developed countries for infectious disease testing and rapid cancer profiling and, in time, be available over-the-counter at pharmacies.

 

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DNA printing of living things: Synthesize DNA 10,000 cheaper than currently possible

Problem: Synthetic biology has the potential to create new organisms that could do an infinite number of things. But the cost of synthesizing DNA is currently prohibitively expensive. 

Solution: Austen has developed a new technique to synthesize DNA 10,000 times cheaper than existing technology. 

Technology: One of the big challenges with DNA synthesis is error correction during fabrication, fabricating the correct sequence of A, T, G and Cs. Austen solves this problem by fabricating billions of strands at once, quickly (and cheaply) optically sequencing them and then selecting the correct DNA sequences using a fast moving laser.

Ahmed Atef's comment, May 22, 2013 1:40 PM
they will
Miro Svetlik's comment, May 23, 2013 3:00 AM
Hello Ahmed, I certainly believe you and I am really curious how it will change our society.
Ahmed Atef's comment, August 15, 2013 8:51 AM
Hello Miro for now you can decode any genome for just two days assembling any genome is the only limitation because the price if you can make dna printer like this that mean during one year your backyard will be filled bye home designed organisms
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Cancers Genomes and their Implications for Curing Cancer (by Bert Vogelstein, JHU)

The full lecture title is "Cancers - Their Genomes, Microenvironments, and Susceptibility to Bacteria-based Therapies" by Bert Vogelstein. The Johns Hopkins Center for Biotechnology Education and the Department of Biology in the Krieger School of Arts and Sciences hosted the American Society for Microbiology's Conference for Undergraduate Educators (ASMCUE) on the Homewood campus. Bert Vogelstein gave the closing plenary lecture, "Cancers - Their Genomes, Microenvironments, and Susceptibility to Bacteria-based Therapies". He teaches at John Hopkins University.

ASMCUE, now in its 18th year, is a professional development conference for approximately 300 educators. Each year, its steering committee organizes a program that offers access to premier scientists in diverse specialties and to educators leading biology education reform efforts. For more information on the conference, go to http://www.asmcue.org/page02d.shtml

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GenomeTV - Full featured lectures and meeting videos about Genomics and Genome Annotation

The Genomics in Medicine Lecture Series is sponsored by NHGRI, in collaboration with Suburban Hospital and Johns Hopkins. Each lecture takes place at Suburban Hospital's lower level auditorium at 8600 Old Georgetown Road in Bethesda, Md. All are welcome to the hour-long lectures, which begin at 8 a.m. on the first Friday of the month, from December 2011 through June 2012.

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